Lung Tissue Research Consortium (LTRC)
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Accession Number
HLB02342020a
Study Type
Epidemiology Study
Collection Type
Open BioLINCC Study
See bottom of this webpage for request information
Study Period
March 2005 – February 2019
NHLBI Division
DLD
Dataset(s) Last Updated
November 30, 2020
Clinical Trial URLs
https://clinicaltrials.gov/ct2/show/NCT02988388
Primary Publication URLs
N/A
Consent
Commercial Use Data Restrictions No
Data Restrictions Based On Area Of Research Yes
Commercial Use Specimen Restrictions Yes
Non-Genetic Use Specimen Restrictions Based On Area Of Use Yes
Genetic Use Of Specimens Allowed? Yes
Genetic Use Area Of Research Restrictions Yes
Specific Consent Restrictions
Data and/or specimens are consented for lung disease research only. Specimens cannot be used to produce commercial products.
Objectives
The LTRC was a biobank resource established by the NHLBI to collect and distribute lung tissue, blood samples, clinical data, and radiographic studies from participants with chronic obstructive pulmonary disease (COPD), idiopathic pulmonary fibrosis (IPF), other related idiopathic interstitial pneumonias (IIP) and interstitial pneumonias associated with connective tissue diseases who undergo medically-indicated lung resection. All tissue and blood specimens and clinical data were banked centrally and stored for distribution to external investigators who have approved study proposals to investigate the pathogenesis or management of lung diseases. The ultimate goal of this program was to enable research that illuminates the pathobiology of lung diseases and leads to novel interventional treatments for these conditions.
Background
Chronic lung diseases are a main cause of death and disability in the United States. COPD affects over 14 million individuals in the United States and represents the third leading cause of mortality. Cigarette smoking is a major risk factor. However, only one of six individuals who smoke develops COPD. This could imply either an individual susceptibility or an additional immunologic or infectious injury to lung cells. Current treatments offer symptomatic relief, but do not prevent disease progression. Better understanding of disease pathogenesis, including the potential roles of lung parenchymal cell apoptosis, immunologic injury, and inflammation may lead to therapies that improve survival and quality of life.
Interstitial pneumonias, including IPF and those associated with connective tissue disease, are less common than COPD, but for many of these diseases there are poor outcomes. For example, IPF has a 50% survival rate 2-3 years following diagnosis, and currently no treatment exists which prolongs survival. The prevalence of IPF is approximately 28 cases per 100,000. The underlying histology of IPF is usual interstitial pneumonia (UIP), which can also occur in connective tissue diseases. The incidences of other interstitial pneumonias such as non-specific interstitial pneumonia (NSIP) or acute interstitial pneumonia (AIP) are less frequent but also occur as an expression of interstitial lung disease in the connective tissue diseases. Moreover, there is significant crossover of these three interstitial pneumonias so that cases of IPF/UIP may also reveal fibrotic NSIP and be complicated by episodes of AIP. This implies common injuries but dissimilar histological responses. All of these processes are characterized by epithelial injury, uncontrolled fibroproliferation and the deposition of collagen, irrespective of the histology. It is clear that a better understanding of the genesis of the interstitial pneumonias is required before effective interventions can be developed.
Participants
A total of 4,486 subjects were enrolled, and lung tissue was obtained from 3,333 of these. Donors were recruited from individuals undergoing lung surgery for nodules or masses, having a biopsy for diagnosis of possible interstitial lung disease (ILD), or undergoing a therapeutic surgery for established lung disease (lung volume reduction surgery or lung transplant). Participants may or may not have had COPD or ILD as determined by their post-consent pulmonary function tests and pathological examinations, and specimens were collected regardless of post-consent pathology or lung function findings. Exclusion criteria included age less than 21 years and diagnosis of cystic fibrosis, pulmonary hypertension, or any other condition that, in the judgment of the investigator, precluded participation.
Design
Written informed consent of each participant was required before any LTRC procedure was performed. Phenotypic data were then obtained that included recording of relevant medical information, a limited exposure history, radiological evaluation, and pulmonary physiological and lung function testing. Questionnaires were administered to determine the extent of symptoms, associated medical illnesses, smoking, environmental and occupational exposures, and quality of life. Laboratory testing included pulmonary function testing, a six-minute walk test, and chest x-ray CT. Blood specimens were collected both for defining the clinical phenotype of donors and to obtain serum, plasma, and DNA for later investigative purposes. At the time of surgery, lung tissues were collected and processed for long-term storage. The LTRC collected only the 'non-tumorous' portions of lung tissue from surgical procedures performed for primary or metastatic lung tumors and received those specimens only after the local pathologist had procured all tissue required for clinical care. Samples of appropriate size were cut and placed in formalin, RNAlater, glutaraldehyde, or liquid nitrogen within 30 minutes of excision (approximately 5% of cases exceeded this target time). Blood and tissue specimens were subsequently shipped to a central Tissue Repository for further processing and long-term storage. A Radiology Center provided quality control and quality assessment of CT data. A Data Coordinating Center managed study operations and maintained a repository of study data.
Conclusions
LTRC established a biospecimen collection that is unique in its size, diseases included, standardization of methods, and extent of phenotypic data, serving as a valuable resource to facilitate research on the pathobiology of lung diseases.
Additional Details
4,486
| COPD | ILD | Control | Other | Unknown | Total Subjects |
---|---|---|---|---|---|---|
Unknown | 5 | 2 | 2 | 0 | 0 | 9 |
21 - 25 | 1 | 3 | 2 | 7 | 0 | 13 |
26 - 30 | 2 | 6 | 4 | 14 | 0 | 26 |
31 - 35 | 2 | 10 | 7 | 13 | 0 | 32 |
36 - 40 | 12 | 27 | 5 | 20 | 0 | 64 |
41 - 45 | 33 | 57 | 27 | 38 | 0 | 155 |
46 - 50 | 105 | 74 | 48 | 73 | 1 | 301 |
51 - 55 | 162 | 131 | 95 | 92 | 1 | 481 |
56 - 60 | 275 | 201 | 170 | 112 | 4 | 762 |
61 - 65 | 302 | 251 | 209 | 109 | 1 | 872 |
66 - 70 | 265 | 207 | 250 | 88 | 0 | 810 |
71 - 75 | 132 | 105 | 231 | 60 | 0 | 528 |
76 - 80 | 67 | 47 | 149 | 28 | 1 | 292 |
81 - 85 | 33 | 8 | 73 | 7 | 0 | 121 |
86 - 90 | 7 | 1 | 8 | 4 | 0 | 20 |
Total | 1,403 | 1,130 | 1,280 | 665 | 8 | 4,486 |
| COPD | ILD | Control | Other | Unknown | Total Subjects |
---|---|---|---|---|---|---|
Unknown | 5 | 2 | 2 | 0 | 0 | 9 |
Male | 710 | 654 | 625 | 312 | 4 | 2,305 |
Female | 688 | 474 | 653 | 353 | 4 | 2,172 |
Total | 1,403 | 1,130 | 1,280 | 665 | 8 | 4,486 |
| COPD | ILD | Control | Other | Unknown | Total Subjects |
---|---|---|---|---|---|---|
Unknown | 12 | 21 | 9 | 11 | 0 | 53 |
American Indian / Alaskan Native | 2 | 5 | 5 | 5 | 1 | 18 |
Asian | 4 | 10 | 9 | 7 | 0 | 30 |
Black | 63 | 72 | 83 | 54 | 2 | 274 |
White | 1,315 | 1,015 | 1,170 | 583 | 5 | 4,088 |
Multiple Races | 7 | 7 | 4 | 5 | 0 | 23 |
Total | 1,403 | 1,130 | 1,280 | 665 | 8 | 4,486 |
Please note that biospecimen availability is subject to review by the NHLBI, BioLINCC, and the NHLBI Biorepository. Certain biospecimens may not be made available for your request. Section 3 of the BioLINCC handbook describes the components of the review process
As of June 1, 2021, most specimens have not undergone any freeze-thaws. However, about 1% of plasma and DNA, and a small fraction of a percent of tissue specimens, have undergone 1 freeze-thaw.
21 March 2024
| Serum | Plasma | DNA | Tissue - FFPE Cassettes | Tissue - Snap Frozen | Tissue - RNALater Frozen | Total |
---|---|---|---|---|---|---|---|
Draw 1 | 6,877 | 5,194 | 9,282 | 3,656 | 2,530 | 4,118 | 31,657 |
Draw 2 | 167 | 106 | 175 | 8,475 | 5,882 | 8,989 | 23,794 |
Draw 3 | 56 | 40 | 165 | 948 | 704 | 1,145 | 3,058 |
Draw 4 | 18 | 23 | 21 | 114 | 73 | 65 | 314 |
Draw 5 | 7 | 8 | 15 | 155 | 145 | 335 | 665 |
Draw 6 | 8 | 9 | 14 | 32 | 0 | 103 | 166 |
Draw 7 | 3 | 0 | 0 | 0 | 0 | 0 | 3 |
Draw 8 | 0 | 0 | 0 | 62 | 45 | 77 | 184 |
Note: For any subject, a draw is tied to a particular draw date, but not necessarily the material type. For example, "draw 1" in the table refers to the first date a subject has a specimen of any material type in our repository. Therefore, it is possible, for example, to have a serum specimen available at draw 2 but not at draw 1.
21 March 2024
The following 6 tables categorize all available specimens by material type.
| Serum | |
---|---|---|
Total number of subjects | Average volume (ml) per subject | |
Draw 1 | 935 | 2.53 |
Draw 2 | 32 | 2.04 |
Draw 3 | 10 | 2.80 |
Draw 4 | 4 | 2.25 |
Draw 5 | 1 | 3.50 |
Draw 6 | 1 | 4.00 |
Draw 7 | 1 | 1.50 |
| Plasma | |
---|---|---|
Total number of subjects | Average volume (ml) per subject | |
Draw 1 | 870 | 1.68 |
Draw 2 | 21 | 1.69 |
Draw 3 | 8 | 2.37 |
Draw 4 | 4 | 2.88 |
Draw 5 | 1 | 4.00 |
Draw 6 | 1 | 4.18 |
| DNA | ||
---|---|---|---|
Total number of subjects | Average mass (µg) per subject | Average vials per subject | |
Draw 1 | 627 | 130.18 | 14.80 |
Draw 2 | 18 | 119.72 | 9.72 |
Draw 3 | 9 | 175.25 | 18.33 |
Draw 4 | 3 | 140.00 | 7.00 |
Draw 5 | 1 | 75.00 | 15.00 |
Draw 6 | 1 | 70.00 | 14.00 |
| Tissue - FFPE Cassettes | |
---|---|---|
Total number of subjects | Average vials per subject | |
Draw 1 | 232 | 15.76 |
Draw 2 | 788 | 10.76 |
Draw 3 | 29 | 32.69 |
Draw 4 | 5 | 22.80 |
Draw 5 | 4 | 38.75 |
Draw 6 | 1 | 32.00 |
Draw 8 | 1 | 62.00 |
| Tissue - Snap Frozen | ||
---|---|---|---|
Total number of subjects | Average mass (mg) per subject | Average vials per subject | |
Draw 1 | 232 | 986.56 | 10.91 |
Draw 2 | 708 | 657.22 | 8.31 |
Draw 3 | 26 | 2749.58 | 27.08 |
Draw 4 | 3 | 2386.67 | 24.33 |
Draw 5 | 4 | 3625.00 | 36.25 |
Draw 8 | 1 | 4300.00 | 45.00 |
| Tissue - RNALater Frozen | ||
---|---|---|---|
Total number of subjects | Average mass (mg) per subject | Average vials per subject | |
Draw 1 | 238 | 517.59 | 17.30 |
Draw 2 | 792 | 340.06 | 11.35 |
Draw 3 | 31 | 1105.16 | 36.94 |
Draw 4 | 5 | 390.00 | 13.00 |
Draw 5 | 4 | 2497.50 | 83.75 |
Draw 6 | 1 | 3030.00 | 103.00 |
Draw 8 | 1 | 2280.00 | 77.00 |
The following 6 specimens categorize just the tissue specimens by the site the specimen was collected from.
| Right Lower Lobe | ||
---|---|---|---|
Total number of subjects | Average mass (mg) per subject | Average vials per subject | |
Draw 1 | 109 | 581.87 | 16.36 |
Draw 2 | 305 | 478.57 | 14.53 |
Draw 3 | 19 | 962.22 | 27.47 |
Draw 4 | 1 | 1610.00 | 49.00 |
Draw 5 | 2 | 1530.00 | 42.50 |
Draw 6 | 1 | 630.00 | 30.00 |
Draw 8 | 1 | 1180.00 | 35.00 |
| Right Upper Lobe | ||
---|---|---|---|
Total number of subjects | Average mass (mg) per subject | Average vials per subject | |
Draw 1 | 138 | 465.84 | 15.24 |
Draw 2 | 391 | 408.36 | 13.36 |
Draw 3 | 23 | 797.27 | 23.57 |
Draw 4 | 1 | 1580.00 | 61.00 |
Draw 5 | 3 | 2143.33 | 51.33 |
Draw 6 | 1 | 660.00 | 32.00 |
Draw 8 | 1 | 1180.00 | 34.00 |
| Right Middle Lobe | ||
---|---|---|---|
Total number of subjects | Average mass (mg) per subject | Average vials per subject | |
Draw 1 | 94 | 547.67 | 15.67 |
Draw 2 | 206 | 500.56 | 14.58 |
Draw 3 | 17 | 750.67 | 19.53 |
Draw 4 | 1 | 130.00 | 18.00 |
Draw 5 | 3 | 1763.33 | 41.33 |
Draw 6 | 1 | 420.00 | 14.00 |
Draw 8 | 1 | 790.00 | 11.00 |
| Left Lower Lobe | ||
---|---|---|---|
Total number of subjects | Average mass (mg) per subject | Average vials per subject | |
Draw 1 | 98 | 659.69 | 18.60 |
Draw 2 | 257 | 489.61 | 15.10 |
Draw 3 | 20 | 1253.16 | 28.50 |
Draw 4 | 2 | 785.00 | 15.00 |
Draw 5 | 3 | 1226.67 | 35.67 |
Draw 6 | 1 | 630.00 | 30.00 |
Draw 8 | 1 | 1250.00 | 46.00 |
| Left Upper Lobe | ||
---|---|---|---|
Total number of subjects | Average mass (mg) per subject | Average vials per subject | |
Draw 1 | 123 | 589.67 | 16.52 |
Draw 2 | 329 | 441.48 | 14.27 |
Draw 3 | 22 | 1177.14 | 28.86 |
Draw 4 | 3 | 856.67 | 19.33 |
Draw 5 | 3 | 1630.00 | 44.67 |
Draw 6 | 1 | 360.00 | 18.00 |
Draw 8 | 1 | 1430.00 | 41.00 |
| Lingula | ||
---|---|---|---|
Total number of subjects | Average mass (mg) per subject | Average vials per subject | |
Draw 1 | 66 | 554.09 | 16.52 |
Draw 2 | 134 | 496.56 | 15.75 |
Draw 3 | 14 | 509.09 | 14.00 |
Draw 4 | 1 | 1650.00 | 36.00 |
Draw 5 | 1 | 1140.00 | 31.00 |
Draw 6 | 1 | 330.00 | 11.00 |
Draw 8 | 1 | 750.00 | 17.00 |
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Resources Available
Specimens and Study DatasetsMaterials Available
- DNA
- Plasma
- Serum
- Tissue - FFPE Cassettes
- Tissue - RNALater Frozen
- Tissue - Snap Frozen
- More Details
Study Documents
- Data Dictionary (PDF - 1.5 MB)
- LTRC Annotated CRFs (PDF - 664.8 KB)
- LTRC Manual of Procedures (PDF - 870.0 KB)
- LTRC Protocol (PDF - 411.8 KB)
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