Biomarkers and molecular endotypes of sarcoidosis: lessons from omics and non-omics studies.

Pubmed ID: 38250062

Pubmed Central ID: PMC10797773

Journal: Frontiers in immunology

Publication Date: Jan. 4, 2024

MeSH Terms: Humans, Algorithms, Sarcoidosis, Biomarkers, Machine Learning, Granulomatous Disease, Chronic

Grants: R01 GM111295, R01 HL134828, R21 AI166913, R21 AI178434

Authors: Ji HL, Xi NMS, Mohan C, Yan X, Jain KG, Zang QS, Gahtan V, Zhao R

Cite As: Ji HL, Xi NMS, Mohan C, Yan X, Jain KG, Zang QS, Gahtan V, Zhao R. Biomarkers and molecular endotypes of sarcoidosis: lessons from omics and non-omics studies. Front Immunol 2024 Jan 4;14:1342429. doi: 10.3389/fimmu.2023.1342429. eCollection 2023.

Studies:

Abstract

Sarcoidosis is a chronic granulomatous disorder characterized by unknown etiology, undetermined mechanisms, and non-specific therapies except TNF blockade. To improve our understanding of the pathogenicity and to predict the outcomes of the disease, the identification of new biomarkers and molecular endotypes is sorely needed. In this study, we systematically evaluate the biomarkers identified through Omics and non-Omics approaches in sarcoidosis. Most of the currently documented biomarkers for sarcoidosis are mainly identified through conventional "one-for-all" non-Omics targeted studies. Although the application of machine learning algorithms to identify biomarkers and endotypes from unbiased comprehensive Omics studies is still in its infancy, a series of biomarkers, overwhelmingly for diagnosis to differentiate sarcoidosis from healthy controls have been reported. In view of the fact that current biomarker profiles in sarcoidosis are scarce, fragmented and mostly not validated, there is an urgent need to identify novel sarcoidosis biomarkers and molecular endotypes using more advanced Omics approaches to facilitate disease diagnosis and prognosis, resolve disease heterogeneity, and facilitate personalized medicine.