Lung Tissue Research Consortium (LTRC) - Catalog

Name

Lung Tissue Research Consortium (LTRC)

Accession Number

HLB02342020a

Acronym

LTRC

Related studies

BSI Study IDs

LTRC

Is public use dataset

False

Keywords

Respiratory Tract Diseases

Has Study Datasets

True

Has Specimens

True

Specimen ID Type

Coded

Study Website

The Framingham Heart Study Group requires that the requestor must obtain full or expedited IRB/Ethics Committee review and approval to obtain these data. Waivers or a determination that the research is exempt from ethical regulations do not suffice.

False

Study type

Epidemiology Study

Collection Type

Open BioLINCC Study

Cohort type

Adult

Interventions

Procedure: Lung biopsy/lobectomy

Study Open Date (Data)

2020-11-30

Study Open Date (Specimens)

2020-11-30

Date materials available

2020-11-30

Last updated

None

Study period

March 2005 – February 2019

Study Contacts
NHLBI Division

DLD

Classification

Lung

HIV study classification

non-HIV

COVID study classification

non-COVID

Pre-Website # of Specimens Shipped

None

# of Returned Specimens

None

Primary Publication URLs
N/A
Conditions

Chronic Obstructive Pulmonary Disease
Interstitial Lung Disease
Lung Diseases
Lung Diseases, Obstructive

Objectives

The LTRC was a biobank resource established by the NHLBI to collect and distribute lung tissue, blood samples, clinical data, and radiographic studies from participants with chronic obstructive pulmonary disease (COPD), idiopathic pulmonary fibrosis (IPF), other related idiopathic interstitial pneumonias (IIP) and interstitial pneumonias associated with connective tissue diseases who undergo medically-indicated lung resection. All tissue and blood specimens and clinical data were banked centrally and stored for distribution to external investigators who have approved study proposals to investigate the pathogenesis or management of lung diseases. The ultimate goal of this program was to enable research that illuminates the pathobiology of lung diseases and leads to novel interventional treatments for these conditions.

Background

Chronic lung diseases are a main cause of death and disability in the United States. COPD affects over 14 million individuals in the United States and represents the third leading cause of mortality. Cigarette smoking is a major risk factor. However, only one of six individuals who smoke develops COPD. This could imply either an individual susceptibility or an additional immunologic or infectious injury to lung cells. Current treatments offer symptomatic relief, but do not prevent disease progression. Better understanding of disease pathogenesis, including the potential roles of lung parenchymal cell apoptosis, immunologic injury, and inflammation may lead to therapies that improve survival and quality of life.


Interstitial pneumonias, including IPF and those associated with connective tissue disease, are less common than COPD, but for many of these diseases there are poor outcomes. For example, IPF has a 50% survival rate 2-3 years following diagnosis, and currently no treatment exists which prolongs survival. The prevalence of IPF is approximately 28 cases per 100,000. The underlying histology of IPF is usual interstitial pneumonia (UIP), which can also occur in connective tissue diseases. The incidences of other interstitial pneumonias such as non-specific interstitial pneumonia (NSIP) or acute interstitial pneumonia (AIP) are less frequent but also occur as an expression of interstitial lung disease in the connective tissue diseases. Moreover, there is significant crossover of these three interstitial pneumonias so that cases of IPF/UIP may also reveal fibrotic NSIP and be complicated by episodes of AIP. This implies common injuries but dissimilar histological responses. All of these processes are characterized by epithelial injury, uncontrolled fibroproliferation and the deposition of collagen, irrespective of the histology. It is clear that a better understanding of the genesis of the interstitial pneumonias is required before effective interventions can be developed.

Participants

A total of 4,486 subjects were enrolled, and lung tissue was obtained from 3,333 of these. Donors were recruited from individuals undergoing lung surgery for nodules or masses, having a biopsy for diagnosis of possible interstitial lung disease (ILD), or undergoing a therapeutic surgery for established lung disease (lung volume reduction surgery or lung transplant). Participants may or may not have had COPD or ILD as determined by their post-consent pulmonary function tests and pathological examinations, and specimens were collected regardless of post-consent pathology or lung function findings. Exclusion criteria included age less than 21 years and diagnosis of cystic fibrosis, pulmonary hypertension, or any other condition that, in the judgment of the investigator, precluded participation.

Design

Written informed consent of each participant was required before any LTRC procedure was performed. Phenotypic data were then obtained that included recording of relevant medical information, a limited exposure history, radiological evaluation, and pulmonary physiological and lung function testing. Questionnaires were administered to determine the extent of symptoms, associated medical illnesses, smoking, environmental and occupational exposures, and quality of life. Laboratory testing included pulmonary function testing, a six-minute walk test, and chest x-ray CT. Blood specimens were collected both for defining the clinical phenotype of donors and to obtain serum, plasma, and DNA for later investigative purposes. At the time of surgery, lung tissues were collected and processed for long-term storage. The LTRC collected only the 'non-tumorous' portions of lung tissue from surgical procedures performed for primary or metastatic lung tumors and received those specimens only after the local pathologist had procured all tissue required for clinical care. Samples of appropriate size were cut and placed in formalin, RNAlater, glutaraldehyde, or liquid nitrogen within 30 minutes of excision (approximately 5% of cases exceeded this target time). Blood and tissue specimens were subsequently shipped to a central Tissue Repository for further processing and long-term storage. A Radiology Center provided quality control and quality assessment of CT data. A Data Coordinating Center managed study operations and maintained a repository of study data.

Conclusions

LTRC established a biospecimen collection that is unique in its size, diseases included, standardization of methods, and extent of phenotypic data, serving as a valuable resource to facilitate research on the pathobiology of lung diseases.

Disease classification

Publications

Mat types

DNA
Plasma
Serum
Tissue - FFPE Cassettes
Tissue - RNALater Frozen
Tissue - Snap Frozen

Network

The study population available in BioLINCC study data may be lower than total study enrollment due to Informed Consent restrictions and other factors.

  • Subjects

    4,486


    Last Modified: Dec. 3, 2020, 11:07 a.m.
  • Age

     

    COPD

    ILD

    Control

    Other

    Unknown

    Total Subjects

    Unknown

    5

    2

    2

    0

    0

    9

    21 - 25

    1

    3

    2

    7

    0

    13

    26 - 30

    2

    6

    4

    14

    0

    26

    31 - 35

    2

    10

    7

    13

    0

    32

    36 - 40

    12

    27

    5

    20

    0

    64

    41 - 45

    33

    57

    27

    38

    0

    155

    46 - 50

    105

    74

    48

    73

    1

    301

    51 - 55

    162

    131

    95

    92

    1

    481

    56 - 60

    275

    201

    170

    112

    4

    762

    61 - 65

    302

    251

    209

    109

    1

    872

    66 - 70

    265

    207

    250

    88

    0

    810

    71 - 75

    132

    105

    231

    60

    0

    528

    76 - 80

    67

    47

    149

    28

    1

    292

    81 - 85

    33

    8

    73

    7

    0

    121

    86 - 90

    7

    1

    8

    4

    0

    20

    Total

    1,403

    1,130

    1,280

    665

    8

    4,486


     


    Last Modified: April 15, 2024, 1:08 p.m.
  • Sex

     

    COPD

    ILD

    Control

    Other

    Unknown

    Total Subjects

    Unknown

    5

    2

    2

    0

    0

    9

    Male

    710

    654

    625

    312

    4

    2,305

    Female

    688

    474

    653

    353

    4

    2,172

    Total

    1,403

    1,130

    1,280

    665

    8

    4,486


     


    Last Modified: April 15, 2024, 1:08 p.m.
  • Race

     

    COPD

    ILD

    Control

    Other

    Unknown

    Total Subjects

    Unknown

    12

    21

    9

    11

    0

    53

    American Indian / Alaskan Native

    2

    5

    5

    5

    1

    18

    Asian

    4

    10

    9

    7

    0

    30

    Black

    63

    72

    83

    54

    2

    274

    White

    1,315

    1,015

    1,170

    583

    5

    4,088

    Multiple Races

    7

    7

    4

    5

    0

    23

    Total

    1,403

    1,130

    1,280

    665

    8

    4,486


     


    Last Modified: April 15, 2024, 1:08 p.m.

Please note that biospecimen availability is subject to review by the NHLBI, BioLINCC, and the NHLBI Biorepository. Certain biospecimens may not be made available for your request. Section 3 of the BioLINCC handbook describes the components of the review process

  • Material Types
  • General Freeze/Thaw Status

    As of June 1, 2021, most specimens have not undergone any freeze-thaws. However, about 1% of plasma and DNA, and a small fraction of a percent of tissue specimens, have undergone 1 freeze-thaw.


    Last Modified: June 1, 2021, 2:18 p.m.
  • Visits (Vials)

    21 March 2024
     

     

    Serum

    Plasma

    DNA

    Tissue - FFPE Cassettes

    Tissue - Snap Frozen

    Tissue - RNALater Frozen

    Total

    Draw 1

    6,877

    5,194

    9,282

    3,656

    2,530

    4,118

    31,657

    Draw 2

    167

    106

    175

    8,475

    5,882

    8,989

    23,794

    Draw 3

    56

    40

    165

    948

    704

    1,145

    3,058

    Draw 4

    18

    23

    21

    114

    73

    65

    314

    Draw 5

    7

    8

    15

    155

    145

    335

    665

    Draw 6

    8

    9

    14

    32

    0

    103

    166

    Draw 7

    3

    0

    0

    0

    0

    0

    3

    Draw 8

    0

    0

    0

    62

    45

    77

    184


    Note: For any subject, a draw is tied to a particular draw date, but not necessarily the material type. For example, "draw 1" in the table refers to the first date a subject has a specimen of any material type in our repository. Therefore, it is possible, for example, to have a serum specimen available at draw 2 but not at draw 1.

     


    Last Modified: April 15, 2024, 1:08 p.m.
  • Visits (Subjects)

    21 March 2024

    The following 6 tables categorize all available specimens by material type.

     

     

    Serum

    Total number of subjects

    Average volume (ml) per subject

    Draw 1

    935

    2.53

    Draw 2

    32

    2.04

    Draw 3

    10

    2.80

    Draw 4

    4

    2.25

    Draw 5

    1

    3.50

    Draw 6

    1

    4.00

    Draw 7

    1

    1.50

     

     

    Plasma

    Total number of subjects

    Average volume (ml) per subject

    Draw 1

    870

    1.68

    Draw 2

    21

    1.69

    Draw 3

    8

    2.37

    Draw 4

    4

    2.88

    Draw 5

    1

    4.00

    Draw 6

    1

    4.18

     

     

    DNA

    Total number of subjects

    Average mass (µg) per subject

    Average vials per subject

    Draw 1

    627

    130.18

    14.80

    Draw 2

    18

    119.72

    9.72

    Draw 3

    9

    175.25

    18.33

    Draw 4

    3

    140.00

    7.00

    Draw 5

    1

    75.00

    15.00

    Draw 6

    1

    70.00

    14.00

     

     

    Tissue - FFPE Cassettes

    Total number of subjects

    Average vials per subject

    Draw 1

    232

    15.76

    Draw 2

    788

    10.76

    Draw 3

    29

    32.69

    Draw 4

    5

    22.80

    Draw 5

    4

    38.75

    Draw 6

    1

    32.00

    Draw 8

    1

    62.00

     

     

    Tissue - Snap Frozen

    Total number of subjects

    Average mass (mg) per subject

    Average vials per subject

    Draw 1

    232

    986.56

    10.91

    Draw 2

    708

    657.22

    8.31

    Draw 3

    26

    2749.58

    27.08

    Draw 4

    3

    2386.67

    24.33

    Draw 5

    4

    3625.00

    36.25

    Draw 8

    1

    4300.00

    45.00

     

     

    Tissue - RNALater Frozen

    Total number of subjects

    Average mass (mg) per subject

    Average vials per subject

    Draw 1

    238

    517.59

    17.30

    Draw 2

    792

    340.06

    11.35

    Draw 3

    31

    1105.16

    36.94

    Draw 4

    5

    390.00

    13.00

    Draw 5

    4

    2497.50

    83.75

    Draw 6

    1

    3030.00

    103.00

    Draw 8

    1

    2280.00

    77.00

     

     

    The following 6 specimens categorize just the tissue specimens by the site the specimen was collected from.
     

     

    Right Lower Lobe

    Total number of subjects

    Average mass (mg) per subject

    Average vials per subject

    Draw 1

    109

    581.87

    16.36

    Draw 2

    305

    478.57

    14.53

    Draw 3

    19

    962.22

    27.47

    Draw 4

    1

    1610.00

    49.00

    Draw 5

    2

    1530.00

    42.50

    Draw 6

    1

    630.00

    30.00

    Draw 8

    1

    1180.00

    35.00

     

     

    Right Upper Lobe

    Total number of subjects

    Average mass (mg) per subject

    Average vials per subject

    Draw 1

    138

    465.84

    15.24

    Draw 2

    391

    408.36

    13.36

    Draw 3

    23

    797.27

    23.57

    Draw 4

    1

    1580.00

    61.00

    Draw 5

    3

    2143.33

    51.33

    Draw 6

    1

    660.00

    32.00

    Draw 8

    1

    1180.00

    34.00

     

     

    Right Middle Lobe

    Total number of subjects

    Average mass (mg) per subject

    Average vials per subject

    Draw 1

    94

    547.67

    15.67

    Draw 2

    206

    500.56

    14.58

    Draw 3

    17

    750.67

    19.53

    Draw 4

    1

    130.00

    18.00

    Draw 5

    3

    1763.33

    41.33

    Draw 6

    1

    420.00

    14.00

    Draw 8

    1

    790.00

    11.00

     

     

    Left Lower Lobe

    Total number of subjects

    Average mass (mg) per subject

    Average vials per subject

    Draw 1

    98

    659.69

    18.60

    Draw 2

    257

    489.61

    15.10

    Draw 3

    20

    1253.16

    28.50

    Draw 4

    2

    785.00

    15.00

    Draw 5

    3

    1226.67

    35.67

    Draw 6

    1

    630.00

    30.00

    Draw 8

    1

    1250.00

    46.00

     

     

    Left Upper Lobe

    Total number of subjects

    Average mass (mg) per subject

    Average vials per subject

    Draw 1

    123

    589.67

    16.52

    Draw 2

    329

    441.48

    14.27

    Draw 3

    22

    1177.14

    28.86

    Draw 4

    3

    856.67

    19.33

    Draw 5

    3

    1630.00

    44.67

    Draw 6

    1

    360.00

    18.00

    Draw 8

    1

    1430.00

    41.00

     

     

    Lingula

    Total number of subjects

    Average mass (mg) per subject

    Average vials per subject

    Draw 1

    66

    554.09

    16.52

    Draw 2

    134

    496.56

    15.75

    Draw 3

    14

    509.09

    14.00

    Draw 4

    1

    1650.00

    36.00

    Draw 5

    1

    1140.00

    31.00

    Draw 6

    1

    330.00

    11.00

    Draw 8

    1

    750.00

    17.00


    Last Modified: April 15, 2024, 1:08 p.m.